STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21194.1Alanine racemase domain protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. (220 aa)    
Predicted Functional Partners:
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
  
 0.841
ADR21567.1
Maf protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.
    0.826
ADR20106.1
DivIVA domain; InterPro IPR007793: IPR019933; KEGG: chu:CHU_0760 cell division initiation protein; PFAM: DivIVA family protein; SPTR: Cell division initiation protein; TIGRFAM: DivIVA domain; PFAM: DivIVA protein; TIGRFAM: DivIVA domain.
  
  
 0.655
rlmN
23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.
 
     0.643
ADR22399.1
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.585
ADR21195.1
Protein of unknown function DUF423; COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: dfe:Dfer_2013 protein of unknown function DUF423; PFAM: protein of unknown function DUF423; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF423).
       0.575
ADR21192.1
Lysine exporter protein (LYSE/YGGA); COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: zpr:ZPR_0018 LysE type amino acid translocator; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Translocator protein, LysE family; PFAM: LysE type translocator.
       0.531
ADR21193.1
GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: dfe:Dfer_0473 GH3 auxin-responsive promoter; PFAM: GH3 auxin-responsive promoter; SPTR: Putative plant auxin-regulated protein; PFAM: GH3 auxin-responsive promoter.
       0.520
rpmC
LSU ribosomal protein L29P; InterPro IPR001854: IPR018254; KEGG: chu:CHU_3154 50S ribosomal protein L29; PFAM: ribosomal protein L29; SPTR: Ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
   
    0.513
rpmJ
LSU ribosomal protein L36P; InterPro IPR000473; KEGG: cat:CA2559_05830 ribosomal protein L36; PFAM: ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; Belongs to the bacterial ribosomal protein bL36 family.
  
    0.510
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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