STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21214.1COGs: COG3943 Virulence protein; InterPro IPR011204; KEGG: clj:CLJU_c00540 hypothetical protein; SPTR: Putative uncharacterized protein. (345 aa)    
Predicted Functional Partners:
ADR21213.1
KEGG: gur:Gura_3599 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR21215.1
KEGG: zpr:ZPR_3366 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.709
ligA
DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
      0.601
ADR20244.1
Restriction modification system DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: mbu:Mbur_0508 restriction modification system DNA specificity subunit; PFAM: restriction modification system DNA specificity domain; SPTR: Type I restriction-modification system specificity subunit; PFAM: Type I restriction modification DNA specificity domain.
  
    0.570
ADR21212.1
Ankyrin; InterPro IPR020683: IPR002110; KEGG: tva:TVAG_184130 ankyrin repeat protein; PFAM: Ankyrin; SPTR: Ankyrin repeat protein, putative.
       0.559
ADR21382.1
Restriction modification system DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: mmw:Mmwyl1_3199 restriction modification system DNA specificity subunit; PFAM: restriction modification system DNA specificity domain; SPTR: Type I restriction enzyme StySJI specificity protein; PFAM: Type I restriction modification DNA specificity domain.
  
    0.544
ADR20240.1
Site-specific DNA-methyltransferase (adenine-specific); COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002296: IPR003356: IPR002052; KEGG: mma:MM_1669 type I restriction-modification system specificity subunit; PFAM: N-6 DNA methylase; PRIAM: Site-specific DNA-methyltransferase (adenine-specific); SPTR: Type I restriction-modification system specificity subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.
  
    0.519
ADR21381.1
N-6 DNA methylase; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356: IPR002296: IPR002052; KEGG: nhl:Nhal_3964 N-6 DNA methylase; PFAM: N-6 DNA methylase; SPTR: N-6 DNA methylase; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.
  
    0.519
ADR21933.1
N-6 DNA methylase; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR002052: IPR003356: IPR002296; KEGG: aat:D11S_1858 putative N-6 DNA methylase; PFAM: N-6 DNA methylase; SPTR: N-6 DNA Methylase family; PFAM: N-6 DNA Methylase.
  
    0.519
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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