STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21224.1KEGG: chu:CHU_1188 hypothetical protein; SPTR: Putative uncharacterized protein. (220 aa)    
Predicted Functional Partners:
ADR21225.1
KEGG: fps:FP1547 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.948
ADR20418.1
KEGG: fps:FP1547 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.780
ADR23153.1
KEGG: fps:FP1547 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.780
ADR20439.1
KEGG: fps:FP1538 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.760
ADR20438.1
KEGG: chu:CHU_1184 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: AAA domain (dynein-related subfamily).
  
     0.714
ADR21203.1
KEGG: chu:CHU_1184 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: AFG1-like ATPase.
  
     0.714
ADR20440.1
KEGG: zpr:ZPR_2233 putative DNA-binding protein; SPTR: Putative DNA-binding protein.
  
     0.517
ADR21202.1
KEGG: zpr:ZPR_2233 putative DNA-binding protein; SPTR: Putative DNA-binding protein.
  
     0.517
ADR21226.1
KEGG: cat:CA2559_11608 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.513
ADR20443.1
Integrase family protein; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: zpr:ZPR_2218 putative transposase; PFAM: integrase family protein; SPTR: Putative transposase; PFAM: Phage integrase family; Belongs to the 'phage' integrase family.
  
     0.411
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.