STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21263.1Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: gfo:GFO_0275 amidohydrolase family protein; PFAM: amidohydrolase; SPTR: Xaa-Pro dipeptidase family enzyme; PFAM: Amidohydrolase family. (426 aa)    
Predicted Functional Partners:
ADR21264.1
KEGG: chu:CHU_0933 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.648
ADR21504.1
COGs: COG2986 Histidine ammonia-lyase; InterPro IPR001106: IPR005921; KEGG: fjo:Fjoh_2576 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; PRIAM: Histidine ammonia-lyase; SPTR: Histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase.
  
  
 0.563
ADR20626.1
Peptidase M10A and M12B matrixin and adamalysin; InterPro IPR001818; KEGG: rbi:RB2501_15574 predicted extracellular metal-dependent peptidase; PFAM: peptidase M10A and M12B matrixin and adamalysin; SPTR: Putative uncharacterized protein.
  
     0.524
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.521
ADR23361.1
KEGG: msv:Mesil_3075 hypothetical protein; SPTR: Putative uncharacterized protein.
  
  
 0.521
ADR21265.1
Protein of unknown function DUF479; COGs: COG3124 conserved hypothetical protein; InterPro IPR007431; KEGG: gfo:GFO_2057 hypothetical protein; PFAM: protein of unknown function DUF479; SPTR: Protein containing DUF479; PFAM: Protein of unknown function, DUF479.
       0.470
ADR21879.1
Peptidase M14 carboxypeptidase A; InterPro IPR000834; KEGG: rbi:RB2501_11282 secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain; PFAM: peptidase M14 carboxypeptidase A; SPTR: Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain; PFAM: Zinc carboxypeptidase.
  
     0.462
ADR23572.1
Arginase/agmatinase/formiminoglutamase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035; KEGG: phe:Phep_4273 arginase/agmatinase/formiminoglutamase; PFAM: Arginase/agmatinase/formiminoglutamase; SPTR: Arginase/agmatinase/formiminoglutamase; PFAM: Arginase family; Belongs to the arginase family.
 
  
 0.417
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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