STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21288.1Hydrolase CocE/NonD family protein; COGs: COG2936 acyl esterase; InterPro IPR005674; KEGG: fjo:Fjoh_4602 peptidase S15; SPTR: Peptidase family S15-like protein; TIGRFAM: hydrolase CocE/NonD family protein; PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family. (737 aa)    
Predicted Functional Partners:
ADR21286.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: sli:Slin_2906 two component transcriptional regulator, LytTR family; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver; SPTR: Two-component system, regulatory protein; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
 
     0.654
ADR21285.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: dfe:Dfer_5141 signal transduction histidine kinase, LytS; PFAM: histidine kinase internal region; SPTR: Putative transmembrane sensor histidine kinase transcription regulator protein; PFAM: Histidine kinase.
 
     0.642
ADR21287.1
KEGG: rbi:RB2501_12192 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.626
ADR21289.1
Abortive infection protein; InterPro IPR003675; KEGG: lga:LGAS_0717 metal-dependent membrane protease; PFAM: Abortive infection protein; SPTR: Integral membrane protein PlnU, membrane-bound protease CAAX family; PFAM: CAAX amino terminal protease family.
       0.594
ADR21290.1
Acetyltransferase; KEGG: zpr:ZPR_1937 acetyltransferase; SPTR: Acetyltransferase.
       0.548
ADR21311.1
Abortive infection protein; InterPro IPR003675; KEGG: rbi:RB2501_12077 CAAX amino terminal protease family protein; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease family family protein; PFAM: CAAX amino terminal protease family.
  
     0.429
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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