STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21292.1Ankyrin; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110: IPR020683; KEGG: rbi:RB2501_05330 ankyrin; SPTR: Ankyrin repeat domain protein; PFAM: Ankyrin repeat. (194 aa)    
Predicted Functional Partners:
ADR21293.1
KEGG: rbi:RB2501_05335 acyltransferase family protein; SPTR: Putative uncharacterized protein; PFAM: Acyltransferase family.
 
     0.936
ADR21291.1
Transcriptional regulator, AraC family; COGs: COG5616 integral membrane protein; InterProIPR018060: IPR013026: IPR000005: IPR020449: IPR 018062: IPR005829: IPR019734; KEGG: rbi:RB2501_05325 serine/threonine kinase; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; Tetratricopeptide repeat; SPTR: Probable serine/threonine kinase; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
 
     0.839
ADR21294.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_12082 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: beta-lactamase; SPTR: D-alanyl-D-alanine carboxypeptidase; PFAM: Beta-lactamase.
 
     0.820
ADR20712.1
Hypothetical protein; InterPro IPR002110: IPR020683; KEGG: tva:TVAG_291510 ankyrin repeat protein; SPTR: Ankyrin repeat protein, putative; PFAM: Ankyrin repeat.
  
     0.772
ADR21295.1
KEGG: ptm:GSPATT00011521001 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.736
ADR20214.1
ATP-dependent helicase HrpB; COGs: COG1643 HrpA-like helicase; InterProIPR011545: IPR001650: IPR007502: IPR014001: IPR 010225: IPR014021; KEGG: chu:CHU_2491 ATP-dependent helicase; PFAM: helicase-associated domain protein; helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent helicase; TIGRFAM: ATP-dependent helicase HrpB; PFAM: Helicase conserved C-terminal domain; Helicase associated domain (HA2); DEAD/DEAH box helicase; TIGRFAM: ATP-dependent helicase HrpB.
    
 0.727
ADR21319.1
Metallophosphoesterase; InterPro IPR004843: IPR006186; KEGG: gsu:GSU2630 serine/threonine protein phosphatase, putative; PFAM: metallophosphoesterase; SPTR: Serine/threonine protein phosphatase, putative; PFAM: Calcineurin-like phosphoesterase.
   
 
 0.635
ADR22669.1
AAA ATPase; KEGG: cpi:Cpin_1073 AAA ATPase; SPTR: AAA ATPase; PFAM: ATPase family associated with various cellular activities (AAA).
    
 0.627
ADR20688.1
InterPro IPR019734: IPR013026: IPR001440; KEGG: pmt:PMT0296 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat; SPTR: TPR-repeat-containing proteins; PFAM: Tetratricopeptide repeat.
  
  0.620
rpsC
SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.618
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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