STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21320.1NmrA family protein; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; KEGG: sli:Slin_1079 NmrA family protein; SPTR: NmrA-like family protein; PFAM: NmrA-like family. (289 aa)    
Predicted Functional Partners:
ADR21090.1
Ferredoxin; InterPro IPR017896: IPR017900; KEGG: chu:CHU_2228 ferredoxin; SPTR: 4Fe-4S ferredoxin, iron-sulfur binding.
   
 0.887
ADR21321.1
NmrA family protein; COGs: COG2910 Putative NADH-flavin reductase; KEGG: tra:Trad_0489 NmrA family protein; SPTR: NmrA family protein; PFAM: NmrA-like family.
 
    0.853
ADR22370.1
Hypothetical protein; InterPro IPR017941; KEGG: fps:FP2365 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated.
  
 
 0.823
ADR22760.1
COGs: COG1428 Deoxynucleoside kinase; InterPro IPR002624; KEGG: fps:FP0262 deoxynucleoside kinase; PFAM: deoxynucleoside kinase; SPTR: Deoxynucleoside kinase subfamily, putative; PFAM: Deoxynucleoside kinase.
   
 0.793
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.731
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.731
ADR21322.1
Transcriptional regulator, HxlR family; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: cyh:Cyan8802_1702 transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; SPTR: Putative uncharacterized protein; PFAM: HxlR-like helix-turn-helix.
 
     0.608
ADR23225.1
COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001041: IPR004489: IPR017896: IPR006058; KEGG: dfe:Dfer_3971 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; PFAM: ferredoxin; SPTR: Succinate dehydrogenase/fumarate reductase iron-sulfur; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
   
 
 0.548
ADR23660.1
COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: chu:CHU_2206 cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; SPTR: Cytochrome-c oxidase; PFAM: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
    
 
 0.500
ADR23732.1
Alpha/beta hydrolase fold protein; COGs: COG2267 Lysophospholipase; InterPro IPR000073; KEGG: afu:AF1753 lysophospholipase; PFAM: alpha/beta hydrolase fold; SPTR: Lysophospholipase; PFAM: Putative lysophospholipase.
  
   0.489
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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