STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21336.1KEGG: cpi:Cpin_6818 hypothetical protein; SPTR: Putative uncharacterized protein. (165 aa)    
Predicted Functional Partners:
ADR21337.1
KEGG: fph:Fphi_0775 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR21338.1
Histidine kinase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR005467: IPR003594; KEGG: cpi:Cpin_6820 histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Probable two-component sensor; manually curated; PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.773
ADR21339.1
Two component transcriptional regulator, LuxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792: IPR001789; KEGG: dfe:Dfer_2281 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; SPTR: Two-component response regulator; PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
       0.773
ADR21340.1
KEGG: cps:CPS_0799 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Semialdehyde dehydrogenase, NAD binding domain.
       0.498
ADR21333.1
Two component transcriptional regulator, LytTR family; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789: IPR007492; KEGG: cpi:Cpin_6586 two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; SPTR: Two component transcriptional regulator, LytTR family; PFAM: Response regulator receiver domain; LytTr DNA-binding domain.
       0.482
ADR21334.1
Signal transduction histidine kinase, LytS; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559: IPR003594; KEGG: phe:Phep_1541 histidine kinase internal region; PFAM: histidine kinase internal region; ATP-binding region ATPase domain protein; SPTR: Signal transduction ATPase, FimS family protein; PFAM: Histidine kinase.
       0.482
ADR21335.1
Hypothetical protein; KEGG: cpi:Cpin_6589 putative transmembrane protein; SPTR: Putative transmembrane protein; PFAM: Predicted membrane protein (DUF2154).
       0.482
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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