STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21366.1KEGG: cat:CA2559_06060 hypothetical protein; SPTR: Putative uncharacterized protein. (271 aa)    
Predicted Functional Partners:
ADR21367.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR017871: IPR003593; KEGG: fjo:Fjoh_4932 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
 
 
 0.969
ADR21365.1
COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122; KEGG: vsp:VS_2958 hypothetical protein; PFAM: Uracil-DNA glycosylase superfamily; SPTR: Putative uncharacterized protein; PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4.
       0.773
ADR21368.1
KEGG: tet:TTHERM_00703420 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR21369.1
KEGG: cpi:Cpin_5460 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.730
ADR22473.1
KEGG: fjo:Fjoh_4762 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: LETM1-like protein.
  
     0.623
ADR23128.1
PKD domain containing protein; InterPro IPR000601: IPR007110; KEGG: dfe:Dfer_3689 PKD domain containing protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; SPTR: Putative uncharacterized protein; PFAM: PKD domain.
  
     0.596
ADR22689.1
Periplasmic copper-binding protein; COGs: COG3420 Nitrous oxidase accessory protein; InterPro IPR006633: IPR006626: IPR007742; KEGG: gfo:GFO_1408 periplasmic copper-binding protein NosD; PFAM: periplasmic copper-binding; SPTR: Periplasmic copper-binding protein NosD; PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies).
  
 
 0.594
ADR23121.1
FG-GAP repeat protein; InterPro IPR013517: IPR018294; KEGG: fps:FP0688 hypothetical protein; PFAM: FG-GAP repeat protein; SPTR: FG-GAP repeat domain protein.
  
     0.576
ADR20259.1
Conserved repeat domain protein; InterPro IPR006530: IPR001434; KEGG: cpi:Cpin_4789 YD repeat protein; PFAM: YD repeat-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: conserved repeat domain protein; YD repeat protein; TIGRFAM: YD repeat (two copies); conserved repeat domain.
  
     0.568
ADR23123.1
Putative membrane protein; InterPro IPR007730: IPR019861; KEGG: gfo:GFO_0053 hypothetical protein; PFAM: Sporulation domain-containing protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative membrane protein; PFAM: Protein of unknown function (DUF3308); Sporulation related domain; TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
    0.566
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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