STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21399.1ABC transporter related protein; COGs: COG2884 ATPase involved in cell division; InterPro IPR003439: IPR017871: IPR003593; KEGG: dfe:Dfer_5046 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ATP-binding protein involved in cell division; PFAM: ABC transporter. (237 aa)    
Predicted Functional Partners:
ADR20778.1
Protein of unknown function DUF214; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: aas:Aasi_0390 hypothetical protein; PFAM: protein of unknown function DUF214; SPTR: Cell division protein FtsX; PFAM: Predicted permease; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 0.970
ADR23095.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: cpi:Cpin_7079 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: ABC-type transport systems, involved in lipoprotein release, permease components; PFAM: Predicted permease.
 
      0.900
ADR22954.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: sli:Slin_4653 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: ABC transporter efflux protein, putative; PFAM: Predicted permease.
 
      0.899
ADR23633.1
Protein of unknown function DUF214; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: dfe:Dfer_5607 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: ABC transporter efflux protein; PFAM: Predicted permease.
 
      0.898
ADR21398.1
KEGG: chu:CHU_2530 hypothetical protein; SPTR: Fructose-6-phosphate aldolase.
       0.690
ADR23501.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593; KEGG: phe:Phep_4277 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter, ATP-binding protein; PFAM: ABC transporter.
  
    0.586
ADR20448.1
Peptidase M23; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR008756: IPR016047: IPR002508; KEGG: cat:CA2559_07981 TonB; PFAM: Peptidase M23; peptidase M56 BlaR1; cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; SPTR: M23/M37 peptidase domain protein; PFAM: BlaR1 peptidase M56; N-acetylmuramoyl-L-alanine amidase; Peptidase family M23.
 
   
 0.539
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.
       0.529
fusA
Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]
  
     0.527
ADR21450.1
Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
  
    0.516
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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