STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21421.1InterPro IPR019860; KEGG: dfe:Dfer_4470 ABC transporter permease; gliding motility-associated protein; SPTR: ABC transporter permease; gliding motility-associated protein; TIGRFAM: gliding motility-associated ABC transporter permease protein GldF; TIGRFAM: gliding motility-associated ABC transporter permease protein GldF. (244 aa)    
Predicted Functional Partners:
ADR21420.1
Gliding-associated putative ABC transporter substrate-binding component GldG; COGs: COG3225 ABC-type uncharacterized transport system involved in gliding motility auxiliary component; InterPro IPR019196: IPR019863; KEGG: dfe:Dfer_3719 gliding motility protein, ABC-related protein; PFAM: ABC-type uncharacterised transport system; SPTR: Gliding motility protein, ABC-related protein; TIGRFAM: gliding-associated putative ABC transporter substrate-binding component GldG; PFAM: ABC-type uncharacterized transport system; TIGRFAM: gliding-associated putative ABC transporter substrate-binding c [...]
  
 0.995
ADR21422.1
Protein involved in gliding motility GldA; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR019864: IPR003593; KEGG: chu:CHU_1545 ABC-type multidrug transporter, ATP-binding protein; gliding motility-associated protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Gliding motility protein; TIGRFAM: gliding motility-associated ABC transporter ATP-binding subunit GldA; PFAM: ABC transporter; TIGRFAM: gliding motility-associated ABC transporter ATP-binding subunit GldA.
 
 
 0.973
ADR21419.1
KEGG: chu:CHU_1548 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.789
ADR22688.1
KEGG: hth:HTH_0161 nitrous oxide reductase accessory protein; SPTR: Nitrous oxide reductase accessory protein; PFAM: NosL.
  
 
 0.679
ADR22689.1
Periplasmic copper-binding protein; COGs: COG3420 Nitrous oxidase accessory protein; InterPro IPR006633: IPR006626: IPR007742; KEGG: gfo:GFO_1408 periplasmic copper-binding protein NosD; PFAM: periplasmic copper-binding; SPTR: Periplasmic copper-binding protein NosD; PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies).
  
 
 0.637
ADR21978.1
InterPro IPR019850; KEGG: dfe:Dfer_4560 protein involved in gliding motility GldD; SPTR: Protein involved in gliding motility GldD; TIGRFAM: gliding motility-associated lipoprotein GldD; TIGRFAM: gliding motility-associated lipoprotein GldD.
  
   
 0.630
ADR22170.1
Gliding motility-associated lipoprotein GldJ; COGs: COG1262 conserved hypothetical protein; InterPro IPR019868: IPR005532; KEGG: chu:CHU_3494 gliding motility-related protein; serine kinase; PFAM: protein of unknown function DUF323; SPTR: Possible gliding motility-related protein; possible serine kinase; TIGRFAM: gliding motility-associated lipoprotein GldJ; PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ.
  
   
 0.626
ADR21069.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439: IPR003593: IPR017871; KEGG: bth:BT_0295 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter.
 
 
 0.556
ADR22686.1
COGs: COG4263 Nitrous oxide reductase; InterPro IPR002429: IPR001505; KEGG: rbi:RB2501_05465 nitrous oxide reductase precursor; PFAM: cytochrome c oxidase subunit II; PRIAM: Nitrous-oxide reductase; SPTR: Nitrous-oxide reductase; PFAM: Cytochrome C oxidase subunit II, periplasmic domain.
  
 
 0.553
ADR22687.1
KEGG: pmx:PERMA_1258 hypothetical protein; SPTR: Putative uncharacterized protein.
  
 
 0.540
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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