STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
ADR21450.1Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (248 aa)    
Predicted Functional Partners:
ADR22735.1
Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
 
 
 0.991
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
 
 
 0.931
ADR21449.1
Hypothetical protein; InterPro IPR005242; KEGG: aas:Aasi_0622 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
       0.800
ADR20834.1
KEGG: chu:CHU_2786 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.744
ADR20032.1
AAA ATPase; InterPro IPR003593; KEGG: gfo:GFO_2637 hypothetical protein; SMART: AAA ATPase; SPTR: ATPase involved in DNA repair; PFAM: ATPase family associated with various cellular activities (AAA); ATPase involved in DNA repair.
  
 
 0.738
cmk
COGs: COG0283 Cytidylate kinase; InterPro IPR011994: IPR003136; KEGG: chu:CHU_0086 cytidylate kinase; PFAM: cytidylate kinase region; SPTR: Cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase.
 
  
 0.704
ADR22831.1
KEGG: dfe:Dfer_4120 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Domain of Unknown Function (DUF349).
  
 
 0.700
panC
Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
    0.545
ADR21399.1
ABC transporter related protein; COGs: COG2884 ATPase involved in cell division; InterPro IPR003439: IPR017871: IPR003593; KEGG: dfe:Dfer_5046 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: Putative ATP-binding protein involved in cell division; PFAM: ABC transporter.
  
    0.516
ADR22734.1
RNA-binding S4 domain protein; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942: IPR006145: IPR000748: IPR018496; KEGG: dfe:Dfer_3919 pseudouridine synthase; PFAM: RNA-binding S4 domain protein; pseudouridine synthase; SMART: RNA-binding S4 domain protein; SPTR: Pseudouridine synthase; PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
 
  
 0.510
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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