STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21470.1Hypothetical protein; KEGG: tle:Tlet_0056 phenylalanyl-tRNA synthetase subunit beta; SPTR: Putative uncharacterized protein. (114 aa)    
Predicted Functional Partners:
ADR21469.1
Rhodanese domain protein; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: rbi:RB2501_02165 rhodanese-like domain protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; SPTR: Putative uncharacterized protein; PFAM: Rhodanese-like domain.
       0.525
ADR21466.1
KEGG: tkm:TK90_0662 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.524
ADR21467.1
Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterProIPR017936: IPR013766: IPR006662: IPR017937: IPR 005746; KEGG: gfo:GFO_3393 thioredoxin; PFAM: Thioredoxin domain-containing protein; SPTR: Thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin; TIGRFAM: thioredoxin.
       0.524
ADR21468.1
Heavy metal transport/detoxification protein; InterPro IPR006121; KEGG: pmm:PMM0131 putative P-type ATPase transporter for copper; PFAM: Heavy metal transport/detoxification protein; SPTR: Putative uncharacterized protein; PFAM: Heavy-metal-associated domain.
       0.524
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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