STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21486.1KEGG: cat:CA2559_01355 hypothetical protein; SPTR: Putative uncharacterized protein. (559 aa)    
Predicted Functional Partners:
ADR21484.1
Protein of unknown function UPF0118; COGs: COG0628 permease; InterPro IPR002549: IPR000560; KEGG: chu:CHU_2697 transport protein; PFAM: protein of unknown function UPF0118; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF20.
 
     0.809
ADR21485.1
KEGG: gfo:GFO_3614 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR20803.1
KEGG: zpr:ZPR_2253 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.561
ADR20990.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: gfo:GFO_2846 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.540
ADR22875.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: dfe:Dfer_1098 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
     0.533
ADR21487.1
Protein of unknown function UPF0118; COGs: COG0628 permease; InterPro IPR002549; KEGG: mmw:Mmwyl1_2379 hypothetical protein; PFAM: protein of unknown function UPF0118; SPTR: Transporter, putative; PFAM: Domain of unknown function DUF20.
       0.470
ADR22286.1
Protein of unknown function DUF490; InterPro IPR007452; KEGG: zpr:ZPR_2082 hypothetical protein; PFAM: protein of unknown function DUF490; SPTR: Putative uncharacterized protein; PFAM: Family of unknown function (DUF490).
  
     0.459
ADR22455.1
Protein of unknown function DUF541; COGs: COG2968 conserved hypothetical protein; InterPro IPR007497; KEGG: cpi:Cpin_0407 protein of unknown function DUF541; PFAM: protein of unknown function DUF541; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF541).
  
     0.426
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.