STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21514.1Amidohydrolase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: gfo:GFO_2541 secreted amidohydrolase; PFAM: amidohydrolase; SPTR: Secreted amidohydrolase; PFAM: Amidohydrolase family. (456 aa)    
Predicted Functional Partners:
ADR21513.1
COGs: COG3361 conserved hypothetical protein; KEGG: zpr:ZPR_0371 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized conserved protein (COG2071).
       0.678
ADR20045.1
KEGG: rba:RB11231 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: DsrE/DsrF-like family.
  
     0.540
ADR20351.1
KEGG: zpr:ZPR_1950 membrane protein; SPTR: Putative uncharacterized protein.
  
     0.468
ADR20496.1
Peptidase U62 modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: gfo:GFO_1940 DNA gyrase modulator family protein; PFAM: peptidase U62 modulator of DNA gyrase; SPTR: Peptidase U62, modulator of DNA gyrase; PFAM: Putative modulator of DNA gyrase.
 
     0.425
ADR20347.1
KEGG: gfo:GFO_1939 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.421
ADR21515.1
Conserved hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
       0.417
rnz
RNAse Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.
       0.417
ADR21517.1
Sulfate transporter/antisigma-factor antagonist STAS; InterPro IPR002645; KEGG: chu:CHU_1913 anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); PFAM: Sulfate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor.
       0.417
ADR23383.1
Secreted prolyl oligopeptidase family protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002471: IPR002470; KEGG: gfo:GFO_2206 secreted prolyl oligopeptidase family protein; SPTR: Secreted prolyl oligopeptidase family protein; PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family.
 
     0.412
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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