STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21529.1Amino acid/polyamine/organocation transporter, APC superfamily; COGs: COG0531 Amino acid transporter; InterPro IPR004841: IPR002293; KEGG: rbi:RB2501_04725 amino acid transporter; PFAM: amino acid permease-associated region; SPTR: Amino acid permease-associated region protein; PFAM: Amino acid permease; TC 2.A.3. (432 aa)    
Predicted Functional Partners:
ADR21528.1
KEGG: rbi:RB2501_04650 hypothetical protein; SPTR: Uncharacterized conserved secreted or membrane protein.
       0.768
ADR21527.1
KEGG: gfo:GFO_1241 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3347).
  
    0.688
ADR21530.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gfo:GFO_2949 HlyD family secretion protein; SPTR: Putative metal transport-related, exported protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: Protein of unknown function (DUF3347); TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.593
ADR21531.1
Hypothetical protein; InterPro IPR012657; KEGG: rbi:RB2501_06420 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: S23 ribosomal protein; TIGRFAM: conserved hypothetical protein TIGR02436.
       0.584
ADR20150.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589; KEGG: hor:Hore_22530 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Oligo-1,6-glucosidase; PFAM: Alpha amylase, catalytic domain.
   
 0.576
ADR20727.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006589: IPR006047: IPR006046; KEGG: sli:Slin_0347 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: AmyM; PFAM: Alpha amylase, catalytic domain.
   
 0.576
ADR20740.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006589: IPR006047; KEGG: zpr:ZPR_2815 alpha amylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase; PFAM: Alpha amylase, catalytic domain.
   
 0.576
ADR21084.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006589: IPR006047; KEGG: fjo:Fjoh_1398 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Alpha amylase; PFAM: Alpha amylase, catalytic domain.
   
 0.576
ADR21963.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR000601: IPR006589: IPR006047; KEGG: chl:Chy400_0553 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; PKD domain containing protein; SMART: alpha amylase catalytic sub domain; PKD domain containing protein; SPTR: Alpha amylase catalytic region; PFAM: Alpha amylase, catalytic domain; PKD domain.
   
 0.576
ADR21532.1
COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: nve:NEMVE_v1g225776 hypothetical protein; PFAM: outer membrane efflux protein; SPTR: Putative uncharacterized protein; PFAM: Outer membrane efflux protein.
       0.416
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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