STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21557.1COGs: COG1446 Asparaginase; InterPro IPR000246; KEGG: sli:Slin_4155 beta-aspartyl-peptidase; PFAM: peptidase T2 asparaginase 2; SPTR: Beta-aspartyl-peptidase; PFAM: Asparaginase. (307 aa)    
Predicted Functional Partners:
ADR21677.1
COGs: COG4242 Cyanophycinase and related exopeptidase; KEGG: sus:Acid_6598 cyanophycinase and related exopeptidase-like protein; SPTR: Cyanophycinase and related exopeptidase-like protein; PFAM: Peptidase family S51; Belongs to the peptidase S51 family.
    
 0.912
ADR20621.1
Asparaginase; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR020827: IPR006034: IPR006033; KEGG: dfe:Dfer_5475 L-asparaginase, type I; PFAM: Asparaginase/glutaminase; PRIAM: 1-alkyl-2-acetylglycerophosphocholine esterase; SPTR: L-asparaginase I; TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I.
     
 0.909
ADR22260.1
COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR006426: IPR017932: IPR000583: IPR001962; KEGG: chu:CHU_0058 asparagine synthase (glutamine-hydrolysing); PFAM: asparagine synthase; glutamine amidotransferase class-II; SPTR: Asparagine synthase (Glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; Domain of unknown function (DUF1933); TIGRFAM: asparagine synthase (glutamine-hydrolyzing).
     
 0.906
ADR23055.1
COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR000583: IPR001962: IPR006426: IPR017932; KEGG: ddr:Deide_20310 putative asparagine synthase (glutamine-hydrolyzing, glutamine-dependent asparagine synthetase); PFAM: asparagine synthase; glutamine amidotransferase class-II; SPTR: Putative asparagine synthase (Glutamine-hydrolyzing, glutamine-dependent asparagine synthetase); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing).
     
 0.906
ADR21363.1
Beta-aspartyl-peptidase; COGs: COG1446 Asparaginase; InterPro IPR000246; KEGG: dfe:Dfer_0246 peptidase T2 asparaginase 2; PFAM: peptidase T2 asparaginase 2; PRIAM: Beta-aspartyl-peptidase; SPTR: Peptidase T2 asparaginase 2; PFAM: Asparaginase.
  
  
 
0.905
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.904
ADR21753.1
Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR001176: IPR004839: IPR004838; KEGG: rbi:RB2501_02675 putative aspartate aminotransferase; PFAM: aminotransferase class I and II; SPTR: Putative aspartate aminotransferase; PFAM: Aminotransferase class I and II.
    
  0.902
ADR20356.1
COGs: COG1794 Aspartate racemase; InterPro IPR004380: IPR015942: IPR018187; KEGG: rbi:RB2501_09150 putative aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: Putative aspartate racemase; TIGRFAM: aspartate racemase; PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase; Belongs to the aspartate/glutamate racemases family.
     
  0.900
pyrB
COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; InterPro IPR006130: IPR006132: IPR006131: IPR002082; KEGG: dfe:Dfer_2657 aspartate carbamoyltransferase catalytic subunit; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; PRIAM: Aspartate carbamoyltransferase; SPTR: Aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM [...]
    
  0.900
ADR21520.1
COGs: COG0137 Argininosuccinate synthase; InterPro IPR001518: IPR018223; KEGG: cpi:Cpin_6556 argininosuccinate synthase; PFAM: argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
     
  0.900
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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