STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21570.1KEGG: chu:CHU_1311 hypothetical protein; SPTR: Histone H1-like protein. (58 aa)    
Predicted Functional Partners:
ADR23069.1
KEGG: chu:CHU_2520 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.765
ADR23241.1
KEGG: dfe:Dfer_2950 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.760
ADR22335.1
KEGG: aas:Aasi_1341 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.742
ADR22391.1
KEGG: dfe:Dfer_3742 hypothetical protein; SPTR: Tetratricopeptide repeat domain protein.
  
     0.734
ADR22462.1
Hypothetical protein; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH.
  
     0.693
ADR21425.1
Peptidase M50; InterPro IPR008915; KEGG: sli:Slin_2710 peptidase M50; PFAM: peptidase M50; SPTR: Peptidase M50; PFAM: Peptidase family M50.
  
     0.686
ADR23425.1
Hypothetical protein; InterPro IPR011652; KEGG: dfe:Dfer_3784 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.658
ADR21745.1
InterPro IPR007730; KEGG: dfe:Dfer_3955 sporulation domain protein; PFAM: Sporulation domain-containing protein; SPTR: Sporulation domain protein; PFAM: Sporulation related domain.
  
     0.657
ADR23611.1
Hypothetical protein; InterPro IPR019734: IPR013026; KEGG: aas:Aasi_0523 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Receptor family ligand binding region.
  
     0.655
ADR22487.1
Tetratricopeptide TPR_1 repeat-containing protein; InterPro IPR019734: IPR013026: IPR001440; KEGG: sli:Slin_5634 tetratricopeptide TPR_2 repeat protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Tetratricopeptide TPR_2 repeat protein.
  
     0.638
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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