STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21588.1KEGG: phe:Phep_1860 hypothetical protein; SPTR: Putative uncharacterized protein. (57 aa)    
Predicted Functional Partners:
ADR21589.1
KEGG: chu:CHU_0933 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR22473.1
KEGG: fjo:Fjoh_4762 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: LETM1-like protein.
  
     0.478
ADR21745.1
InterPro IPR007730; KEGG: dfe:Dfer_3955 sporulation domain protein; PFAM: Sporulation domain-containing protein; SPTR: Sporulation domain protein; PFAM: Sporulation related domain.
  
     0.436
ADR21406.1
PDZ/DHR/GLGF domain protein; InterPro IPR001478: IPR001969; KEGG: phe:Phep_0001 PDZ/DHR/GLGF domain protein; PFAM: PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; SPTR: Putative uncharacterized protein; PFAM: Retroviral aspartyl protease; PDZ domain (Also known as DHR or GLGF).
  
     0.407
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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