STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21591.1COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: rbi:RB2501_07330 sodium/glucose cotransporter; PFAM: Na+/solute symporter; SPTR: Transporter, SSS family, putative; PFAM: Sodium:solute symporter family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (595 aa)    
Predicted Functional Partners:
ADR21247.1
Proline dehydrogenase; InterPro IPR002872; KEGG: dfe:Dfer_4393 proline dehydrogenase; PFAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; PFAM: Proline dehydrogenase.
  
  
 0.597
ADR22352.1
COGs: COG1966 Carbon starvation protein predicted membrane protein; InterPro IPR003706; KEGG: tmt:Tmath_1896 carbon starvation protein CstA; PFAM: carbon starvation protein CstA; SPTR: Carbon starvation-induced protein; PFAM: Carbon starvation protein CstA.
 
    0.581
ADR21590.1
OsmC family protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR000073: IPR003718; KEGG: gfo:GFO_1021 OsmC-like protein; PFAM: OsmC family protein; alpha/beta hydrolase fold; SPTR: Hydrolases of the alpha/beta superfamily; PFAM: Prolyl oligopeptidase family; OsmC-like protein.
  
    0.502
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
  
 0.500
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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