STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21610.1COGs: COG2836 conserved hypothetical protein; KEGG: fba:FIC_00141 heavy-metal-associated domain (N-terminus) and membrane-bounded cytochrome biogenesis CycZ-like domain, possible membrane copper tolerance protein; SPTR: Putative uncharacterized protein. (233 aa)    
Predicted Functional Partners:
ADR21608.1
Cytochrome c oxidase accessory protein CcoG; COGs: COG0348 Polyferredoxin; InterPro IPR017900: IPR017896: IPR014116; KEGG: gfo:GFO_1436 FixG-like iron-sulfur-cluster-binding protein; SPTR: Iron-sulfur cluster-binding protein; TIGRFAM: cytochrome c oxidase accessory protein CcoG; PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG.
 
     0.954
ADR21609.1
KEGG: cpi:Cpin_0685 FixH family protein; SPTR: Putative uncharacterized protein; PFAM: FixH.
 
     0.903
ADR21605.1
COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883: IPR003468: IPR009056: IPR004677; KEGG: sli:Slin_3562 cytochrome c oxidase, cbb3-type, subunit I; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Probable cytochrome oxidase subunit (Cbb3-type); TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; cytochrome c oxidase, cbb3-type, subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cyt [...]
 
   
 0.884
ADR21607.1
Cytochrome c class I; InterPro IPR008168: IPR003088: IPR009056; KEGG: zpr:ZPR_2303 cbb3-type cytochrome c oxidase subunit III; PFAM: cytochrome c class I; SPTR: Cytochrome-c oxidase fixP chain; PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III.
 
     0.877
ADR21603.1
E1-E2 ATPase-associated domain protein; COGs: COG2217 Cation transport ATPase; InterProIPR001757: IPR008250: IPR005834: IPR018303: IPR 006121; KEGG: chu:CHU_1133 Cu(I)-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Cation transport ATPase, E1-E2 family protein; PFAM: E1-E2 ATPase; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC.
 
   
 0.851
ADR21604.1
InterPro IPR004714; KEGG: fps:FP1154 cytochrome cbb3 oxidase maturation protein CcoS; PFAM: cytochrome oxidase maturation protein cbb3-type; SPTR: Cytochrome oxidase maturation protein, Cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type.
 
     0.830
ADR22701.1
Cytochrome-c oxidase; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883; KEGG: gfo:GFO_1398 cbb3-type cytochrome c oxidase subunit I; PFAM: cytochrome c oxidase subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cbb3-type cytochrome c oxidase subunit I; PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I.
 
   
 0.749
ADR21638.1
COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197: IPR010723: IPR006638: IPR004558; KEGG: fps:FP1163 coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase HemN; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
 
   
 0.647
ADR22702.1
COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR009056: IPR003468: IPR003088; KEGG: gfo:GFO_1397 cbb3-type cytochrome c oxidase subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c class I; SPTR: Cbb3-type cytochrome c oxidase subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
 
     0.573
ADR21606.1
KEGG: rbi:RB2501_04160 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Cbb3-type cytochrome oxidase component FixQ.
 
     0.555
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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