STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21641.1beta-Ig-H3/fasciclin; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: cya:CYA_0079 fasciclin domain-containing protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; SPTR: Fasciclin domain protein; PFAM: Fasciclin domain. (175 aa)    
Predicted Functional Partners:
ADR21573.1
beta-Ig-H3/fasciclin; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782: IPR002160; KEGG: rbi:RB2501_12547 putative adhesion lipoprotein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; SPTR: Putative adhesion lipoprotein; PFAM: Fasciclin domain.
  
     0.773
ADR23099.1
beta-Ig-H3/fasciclin; InterPro IPR000782; KEGG: rbi:RB2501_12547 putative adhesion lipoprotein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; SPTR: Putative adhesion lipoprotein; PFAM: Fasciclin domain.
  
     0.746
ADR21642.1
KEGG: fjo:Fjoh_1859 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF983).
       0.524
ADR21881.1
beta-Ig-H3/fasciclin; InterPro IPR000782; KEGG: cpi:Cpin_6992 hypothetical protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; SPTR: Putative uncharacterized protein; PFAM: Fasciclin domain.
  
     0.489
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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