STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21677.1COGs: COG4242 Cyanophycinase and related exopeptidase; KEGG: sus:Acid_6598 cyanophycinase and related exopeptidase-like protein; SPTR: Cyanophycinase and related exopeptidase-like protein; PFAM: Peptidase family S51; Belongs to the peptidase S51 family. (365 aa)    
Predicted Functional Partners:
ADR21363.1
Beta-aspartyl-peptidase; COGs: COG1446 Asparaginase; InterPro IPR000246; KEGG: dfe:Dfer_0246 peptidase T2 asparaginase 2; PFAM: peptidase T2 asparaginase 2; PRIAM: Beta-aspartyl-peptidase; SPTR: Peptidase T2 asparaginase 2; PFAM: Asparaginase.
    
 0.913
ADR21557.1
COGs: COG1446 Asparaginase; InterPro IPR000246; KEGG: sli:Slin_4155 beta-aspartyl-peptidase; PFAM: peptidase T2 asparaginase 2; SPTR: Beta-aspartyl-peptidase; PFAM: Asparaginase.
    
 0.912
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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