STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21708.1COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: rbi:RB2501_01111 putative puter membrane protein; PFAM: outer membrane efflux protein; SPTR: Putative puter membrane protein; PFAM: Outer membrane efflux protein. (394 aa)    
Predicted Functional Partners:
ADR21706.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR000089: IPR006143; KEGG: rbi:RB2501_01101 secretion protein HlyD; PFAM: biotin/lipoyl attachment domain-containing protein; SPTR: Secretion protein HlyD; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
   0.946
ADR21704.1
Heavy metal efflux pump, CzcA family; COGs: COG3696 Putative silver efflux pump; InterPro IPR001036: IPR004763; KEGG: gfo:GFO_1306 heavy metal cation efflux protein CzcA; PFAM: acriflavin resistance protein; SPTR: Heavy metal cation efflux protein CzcA; TIGRFAM: heavy metal efflux pump, CzcA family; PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
    0.880
ADR21707.1
KEGG: rbi:RB2501_01106 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.732
ADR22258.1
Outer membrane efflux protein; COGs: COG1566 Multidrug resistance efflux pump; KEGG: zpr:ZPR_2947 outer membrane efflux protein; SPTR: Putative uncharacterized protein.
 
 
 0.579
ADR21705.1
Hypothetical protein; InterPro IPR012657; KEGG: gur:Gura_1699 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: S23 ribosomal protein; TIGRFAM: conserved hypothetical protein TIGR02436.
       0.574
ADR21709.1
KEGG: rbi:RB2501_01116 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.557
ADR21030.1
Efflux transporter, RND family, MFP subunit; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: sli:Slin_1204 efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; SPTR: Membrane fusion efflux protein, putative; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.514
ADR21064.1
Acriflavin resistance protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR003439: IPR003593: IPR017871: IPR001036; KEGG: bth:BT_0300 AcrB/AcrD/AcrF family cation efflux protein; PFAM: acriflavin resistance protein; ABC transporter related; SMART: AAA ATPase; SPTR: Putative uncharacterized protein; PFAM: ABC transporter; AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 
 0.484
ADR23397.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cpi:Cpin_0954 efflux transporter, RND family, MFP subunit; SPTR: ABC transporter permease; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit.
  
   0.423
ADR21530.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gfo:GFO_2949 HlyD family secretion protein; SPTR: Putative metal transport-related, exported protein; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: Protein of unknown function (DUF3347); TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.419
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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