STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21776.1KEGG: cpi:Cpin_4444 YCII-related; SPTR: Putative uncharacterized protein. (150 aa)    
Predicted Functional Partners:
ADR21777.1
Uncharacterized protein family UPF0126; COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: dfe:Dfer_5003 protein of unknown function UPF0126; PFAM: Uncharacterised protein family UPF0126; SPTR: Putative uncharacterized protein; PFAM: UPF0126 domain.
       0.718
ADR21775.1
COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000639: IPR000073; KEGG: dfe:Dfer_5071 alpha/beta hydrolase fold protein; PFAM: alpha/beta hydrolase fold; SPTR: Alpha/beta superfamily hydrolase; PFAM: alpha/beta hydrolase fold.
  
    0.700
ADR23740.1
KEGG: coc:Coch_0140 conserved hypothetical protein, membrane; SPTR: Putative uncharacterized protein.
  
     0.474
ADR21254.1
Polyketide cyclase/dehydrase; InterPro IPR019587; KEGG: swp:swp_4288 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein; PFAM: Polyketide cyclase / dehydrase and lipid transport.
  
     0.405
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.