STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21780.1KEGG: gfo:GFO_1062 membrane protein; SPTR: Putative uncharacterized protein. (182 aa)    
Predicted Functional Partners:
ADR21781.1
KEGG: zpr:ZPR_1704 molecular chaperone DnaK; SPTR: Molecular chaperone DnaK.
 
     0.715
ADR23195.1
Protein of unknown function DUF202; InterPro IPR003807; KEGG: zpr:ZPR_3646 hypothetical protein; PFAM: protein of unknown function DUF202; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function DUF.
  
     0.510
ADR20983.1
Antibiotic biosynthesis monooxygenase; COGs: COG1359 conserved hypothetical protein; InterPro IPR007138; KEGG: sli:Slin_4551 antibiotic biosynthesis monooxygenase; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Antibiotic biosynthesis monooxygenase domain protein; PFAM: Antibiotic biosynthesis monooxygenase.
  
     0.464
ADR21782.1
Ribosomal large subunit pseudouridine synthase D; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: phe:Phep_0707 pseudouridine synthase; PFAM: pseudouridine synthase; SPTR: Ribosomal large subunit pseudouridine synthase C; PFAM: RNA pseudouridylate synthase.
       0.461
ADR20794.1
KEGG: sli:Slin_5875 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.443
ADR21779.1
COGs: COG4623 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; InterPro IPR001638: IPR008258: IPR000189; KEGG: cts:Ctha_0374 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Lytic transglycosylase catalytic; PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3.
       0.437
ADR20320.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: phe:Phep_1431 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Putative uncharacterized protein; PFAM: Glycosyl transferase family 2.
  
     0.406
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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