STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21793.1TonB-dependent receptor plug; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: bfs:BF4169 putative TonB-linked outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Putative uncharacterized protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain. (989 aa)    
Predicted Functional Partners:
ADR21792.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: dfe:Dfer_4455 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
     0.949
ADR20732.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: srm:SRM_00437 conserved hypothetical protein, outer membrane, containing RagB/SusD domain; PFAM: RagB/SusD domain protein; SPTR: Putative uncharacterized protein; PFAM: SusD family.
 
   
 0.747
ADR22864.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: gfo:GFO_2921 SusD/RagB family protein; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein; PFAM: SusD family.
 
     0.739
ADR21791.1
Hypothetical protein; KEGG: gur:Gura_3011 LamG domain-containing protein; SPTR: Putative uncharacterized protein.
       0.681
ADR21790.1
COGs: COG5368 conserved hypothetical protein; KEGG: dfe:Dfer_4453 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2329).
 
     0.662
ADR21995.1
KEGG: sli:Slin_1298 hypothetical protein; SPTR: Putative outer membrane protein.
  
   
 0.657
ADR22874.1
KEGG: sru:SRU_2860 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   
 0.646
ADR22820.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
   0.621
ADR20165.1
RagB/SusD domain protein; InterPro IPR012944: IPR019734: IPR013026; KEGG: zpr:ZPR_3693 putative outer membrane protein probably involved in nutrient binding; PFAM: RagB/SusD domain protein; SPTR: Putative outer membrane protein, probably involved in nutrient binding; PFAM: SusD family.
     0.616
ADR23586.1
TonB-dependent receptor plug; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910: IPR000531; KEGG: phe:Phep_0221 TonB-dependent receptor; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor domain protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
    0.614
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.