STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21836.1Histidine kinase; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003594: IPR004358: IPR005467; KEGG: cpi:Cpin_0952 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Response regulator receiver domain protein (CheY-like); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (449 aa)    
Predicted Functional Partners:
ADR21837.1
Two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterProIPR002078: IPR001789: IPR003593: IPR002197: IPR 020441; KEGG: dfe:Dfer_4836 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; helix-turn-helix Fis-type; SMART: response regulator receiver; AAA ATPase; SPTR: Putative two-component response regulator transcriptional regulatory protein; PFAM: Respo [...]
 
 
 0.943
ADR20067.1
Putative two component, sigma54 specific, transcriptional regulator, Fis family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789: IPR002078: IPR003593; KEGG: chu:CHU_1965 response regulatory protein, sigma 54 related; PFAM: sigma-54 factor interaction domain-containing protein; response regulator receiver; SMART: response regulator receiver; AAA ATPase; SPTR: Response regulatory protein, sigma 54 related; PFAM: Response regulator receiver domain; Sigma-54 interaction domain.
 0.933
ADR23446.1
COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterProIPR005467: IPR003660: IPR004358: IPR003661: IPR 003594; KEGG: sli:Slin_3020 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SPTR: Sensory transduction histidine kinase; PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain.
 
  
0.920
ADR23385.1
COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR005467: IPR004358: IPR003594; KEGG: cpi:Cpin_0952 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: Response regulator receiver domain protein (CheY-like); PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
  
 
0.917
ADR23402.1
Protein of unknown function DUF214; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: sli:Slin_4595 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
    0.790
ADR23403.1
Protein of unknown function DUF214; InterPro IPR003838; KEGG: zpr:ZPR_4641 putative FtsX-related transmembrane transport protein; PFAM: protein of unknown function DUF214; SPTR: Putative FtsX-related transmembrane transport protein; PFAM: Predicted permease.
 
    0.790
ADR23399.1
InterPro IPR003838; KEGG: cpi:Cpin_2954 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative FtsX-related transmembrane transport protein; PFAM: Predicted permease.
 
    0.789
ADR23401.1
InterPro IPR003838; KEGG: sli:Slin_4615 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative uncharacterized protein; PFAM: Predicted permease.
 
    0.787
ADR23404.1
InterPro IPR003838; KEGG: cpi:Cpin_2464 protein of unknown function DUF214; PFAM: protein of unknown function DUF214; SPTR: Putative transporter permease protein; PFAM: Predicted permease.
 
     0.782
ADR23397.1
Efflux transporter, RND family, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cpi:Cpin_0954 efflux transporter, RND family, MFP subunit; SPTR: ABC transporter permease; TIGRFAM: efflux transporter, RND family, MFP subunit; TIGRFAM: RND family efflux transporter, MFP subunit.
 
     0.781
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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