STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21860.1InterPro IPR011701; KEGG: gfo:GFO_0020 major facilitator superfamily permease; PFAM: major facilitator superfamily MFS_1; SPTR: Major facilitator superfamily permease; PFAM: Major Facilitator Superfamily. (400 aa)    
Predicted Functional Partners:
ADR21652.1
Extracellular solute-binding protein family 1; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: drm:Dred_1529 extracellular solute-binding protein; PFAM: extracellular solute-binding protein family 1; SPTR: Ferric iron uptake ABC transporter (FeT) family, substrate binding protein; PFAM: Bacterial extracellular solute-binding protein.
  
  
 0.626
ADR22881.1
COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060: IPR018093; KEGG: zpr:ZPR_3532 choline/carnitine/betaine transport; PFAM: BCCT transporter; SPTR: Putative choline transporter; TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; Belongs to the BCCT transporter (TC 2.A.15) family.
 
     0.499
ADR21861.1
KEGG: pyo:PY03578 hypothetical protein; SPTR: Putative uncharacterized protein PY03578.
       0.474
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.408
ADR21859.1
DEAD/DEAH box helicase domain protein; COGs: COG0513 Superfamily II DNA and RNA helicase; InterProIPR000629: IPR014001: IPR001650: IPR011545: IPR 014021: IPR014014; KEGG: sli:Slin_5691 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: ATP-dependent RNA helicase; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; Belongs to the DEAD box helicase family.
       0.402
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.