STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21863.1KEGG: dfe:Dfer_3756 hypothetical protein; SPTR: Putative uncharacterized protein. (191 aa)    
Predicted Functional Partners:
ADR21864.1
PKD domain containing protein; InterPro IPR000601: IPR006626; KEGG: dfe:Dfer_4525 parallel beta-helix repeat protein; PFAM: PKD domain containing protein; SMART: PKD domain containing protein; Parallel beta-helix repeat; SPTR: Parallel beta-helix repeat protein; PFAM: PKD domain; REJ domain.
 
     0.674
ADR22595.1
Sugar-phosphate isomerase, RpiB/LacA/LacB family; COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500: IPR004785; KEGG: chu:CHU_3631 ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; SPTR: Ribose 5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family.
  
  
 0.590
ADR21278.1
KEGG: cat:CA2559_04170 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.556
ADR23447.1
KEGG: chu:CHU_2196 hypothetical protein; SPTR: Putative uncharacterized protein.
   
   0.525
ADR20211.1
Putative membrane protein; InterPro IPR019861; KEGG: chu:CHU_2464 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: putative membrane protein; PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein.
  
     0.514
ADR21277.1
TonB-dependent receptor plug; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910: IPR000531; KEGG: cat:CA2559_04165 outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: Outer membrane protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor.
  
     0.499
ADR22580.1
KEGG: chu:CHU_3275 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.464
ADR21792.1
RagB/SusD domain protein; InterPro IPR012944; KEGG: dfe:Dfer_4455 RagB/SusD domain protein; PFAM: RagB/SusD domain protein; SPTR: RagB/SusD domain protein; PFAM: SusD family.
  
     0.458
ADR21862.1
Peptidase S9B dipeptidylpeptidase IV domain protein; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469; KEGG: zpr:ZPR_0345 secreted dipeptidyl-peptidase IV family protein; PFAM: peptidase S9B dipeptidylpeptidase IV domain protein; SPTR: Secreted dipeptidyl-peptidase IV family protein; PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region.
       0.447
ADR22975.1
KEGG: chu:CHU_3449 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   
 0.434
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.