STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21880.1KEGG: dfe:Dfer_5072 OmpA-related protein; SPTR: OmpA-related protein. (1107 aa)    
Predicted Functional Partners:
ADR21881.1
beta-Ig-H3/fasciclin; InterPro IPR000782; KEGG: cpi:Cpin_6992 hypothetical protein; PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; SPTR: Putative uncharacterized protein; PFAM: Fasciclin domain.
       0.664
ADR22820.1
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
   0.550
ADR23314.1
Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
   0.543
ADR21879.1
Peptidase M14 carboxypeptidase A; InterPro IPR000834; KEGG: rbi:RB2501_11282 secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain; PFAM: peptidase M14 carboxypeptidase A; SPTR: Secreted protein containing N-terminal Zinc-dependent carboxypeptidase related domain; PFAM: Zinc carboxypeptidase.
 
     0.481
ADR23098.1
TonB-dependent receptor; InterPro IPR012910: IPR000531; KEGG: phe:Phep_3310 TonB-dependent receptor; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: Putative TonB-dependent outer membrane exported protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain.
  
    0.476
ADR20338.1
KEGG: sli:Slin_1995 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.432
ADR22294.1
TonB family protein; InterPro IPR006260; KEGG: cpi:Cpin_0930 TonB family protein; PFAM: TonB domain; SPTR: TonB family protein; TIGRFAM: TonB family protein; PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain.
  
   0.432
ADR22580.1
KEGG: chu:CHU_3275 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.432
ADR22859.1
Phosphoesterase PA-phosphatase related protein; InterPro IPR000326; KEGG: gfo:GFO_1033 vanadium-dependent haloperoxidase family protein; PFAM: phosphoesterase PA-phosphatase related; SPTR: Vanadium-dependent haloperoxidase family protein; PFAM: PAP2 superfamily.
  
 
   0.401
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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