STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21890.1Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: rmr:Rmar_1597 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase, M23/M37 family protein; PFAM: Peptidase family M23. (432 aa)    
Predicted Functional Partners:
ADR21889.1
Patatin; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: phe:Phep_1271 patatin; PFAM: Patatin; SPTR: Patatin; PFAM: Patatin-like phospholipase.
       0.603
ADR23304.1
Peptidase M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: chu:CHU_0023 M23/M37 family peptidase; PFAM: Peptidase M23; SPTR: Possible membrane protein; possible peptidase, M23/M37 family; PFAM: Peptidase family M23.
 
   
 0.452
uppP
Bacitracin resistance protein BacA; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
 
    0.446
ADR21887.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006690: IPR011659: IPR006665: IPR006664; KEGG: chu:CHU_0217 outer membrane protein, porin F precursor; PFAM: OmpA/MotB domain protein; WD40-like beta Propeller containing protein; SPTR: Outer membrane protein, porin F; PFAM: WD40-like Beta Propeller Repeat; OmpA family.
  
    0.427
ADR21888.1
OmpA/MotB domain protein; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665: IPR006664; KEGG: chu:CHU_3735 outer membrane protein; PFAM: OmpA/MotB domain protein; SPTR: Possible outer membrane protein; PFAM: OmpA family.
  
    0.427
ADR21891.1
KEGG: dfe:Dfer_2587 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.425
ADR21779.1
COGs: COG4623 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; InterPro IPR001638: IPR008258: IPR000189; KEGG: cts:Ctha_0374 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase catalytic; extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: Lytic transglycosylase catalytic; PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3.
 
     0.423
ADR23307.1
COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterProIPR008258: IPR018392: IPR013838: IPR000189: IPR 002482; KEGG: chu:CHU_0026 peptidoglycan-binding lytic transglycosylase; PFAM: Lytic transglycosylase catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; SPTR: Putative lytic murein transglycosylase; PFAM: Transglycosylase SLT domain; LysM domain.
 
  
 0.419
ADR20978.1
Peptidase M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: dfe:Dfer_2938 peptidase M23; PFAM: Peptidase M23; SPTR: Peptidase M23; PFAM: Peptidase family M23.
  
     0.416
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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