STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21902.1Protein of unknown function DUF1573; InterPro IPR011467; KEGG: cat:CA2559_12918 hypothetical protein; PFAM: protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1573). (189 aa)    
Predicted Functional Partners:
ADR21903.1
COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: sli:Slin_6327 preprotein translocase, YajC subunit; PFAM: YajC family protein; SPTR: Putative uncharacterized protein; TIGRFAM: preprotein translocase, YajC subunit; PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit.
       0.806
ADR21904.1
KEGG: sli:Slin_6326 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.803
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.803
ADR21901.1
KEGG: sli:Slin_6329 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.690
ADR23684.1
KEGG: dfe:Dfer_0221 DoxX family protein; SPTR: Putative uncharacterized protein.
  
     0.572
ADR23272.1
KEGG: chu:CHU_2718 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.541
nusB
NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.
       0.526
ADR23003.1
KEGG: chu:CHU_3167 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3467).
  
     0.491
ADR20133.1
KEGG: dfe:Dfer_2899 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3109).
  
     0.487
ADR22158.1
Metallophosphoesterase; COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: dfe:Dfer_2991 UDP-2,3-diacylglucosamine hydrolase; PFAM: metallophosphoesterase; SPTR: Putative UDP-2,3-diacylglucosamine hydrolase; PFAM: Calcineurin-like phosphoesterase.
  
     0.429
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.