STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21936.1InterPro IPR000494; KEGG: zpr:ZPR_1515 leucine-rich protein; PFAM: epidermal growth-factor receptor (EGFR) L domain; SPTR: Putative uncharacterized protein; PFAM: Receptor L domain. (244 aa)    
Predicted Functional Partners:
ADR22910.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: cat:CA2559_01875 D-alanyl-D-alanine carboxypeptidase; PFAM: beta-lactamase; SPTR: D-alanyl-D-alanine carboxypeptidase; PFAM: Beta-lactamase.
  
     0.460
ADR21935.1
KEGG: ppa:PAS_chr4_0958 hypothetical protein; SPTR: Hypothetical phage protein.
       0.444
ADR20752.1
KEGG: cat:CA2559_12608 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.439
ADR22007.1
KEGG: rbi:RB2501_12087 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.426
ADR22437.1
KEGG: rbi:RB2501_12087 hypothetical protein; SPTR: Putative uncharacterized protein.
  
   0.426
ADR21485.1
KEGG: gfo:GFO_3614 hypothetical protein; SPTR: Putative uncharacterized protein.
 
   0.418
ADR21294.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_12082 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: beta-lactamase; SPTR: D-alanyl-D-alanine carboxypeptidase; PFAM: Beta-lactamase.
  
     0.412
ADR21291.1
Transcriptional regulator, AraC family; COGs: COG5616 integral membrane protein; InterProIPR018060: IPR013026: IPR000005: IPR020449: IPR 018062: IPR005829: IPR019734; KEGG: rbi:RB2501_05325 serine/threonine kinase; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; Tetratricopeptide repeat; SPTR: Probable serine/threonine kinase; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family.
 
    0.408
ADR20303.1
Methyltransferase type 11; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: sli:Slin_3469 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; PFAM: Methyltransferase domain.
  
     0.405
ADR21307.1
Esterase; COGs: COG2819 hydrolase of the alpha/beta superfamily; InterPro IPR019734: IPR013026: IPR000801: IPR001440; KEGG: sli:Slin_2144 putative esterase; PFAM: esterase; Tetratricopeptide TPR_1 repeat-containing protein; SPTR: Putative esterase; PFAM: Putative esterase.
  
     0.405
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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