STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21954.1COGs: COG4185 conserved hypothetical protein; KEGG: bvu:BVU_1630 hypothetical protein; SPTR: Uncharacterized protein conserved in bacteria; PFAM: Zeta toxin. (191 aa)    
Predicted Functional Partners:
ADR21955.1
KEGG: dfe:Dfer_4482 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.789
ADR21956.1
Protein of unknown function DUF2136; COGs: COG4680 conserved hypothetical protein; InterPro IPR018669; KEGG: gfo:GFO_0923 hypothetical protein; PFAM: Protein of unknown function DUF2136; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2136).
       0.411
ADR20037.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: gfo:GFO_2642 HTH_3 family transcriptional regulator protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
   
 
 0.406
ADR20237.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: caa:Caka_1280 helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Helix-turn-helix domain protein; PFAM: Helix-turn-helix.
   
 
 0.406
ADR20251.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: chu:CHU_3780 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family protein; PFAM: Helix-turn-helix.
   
 
 0.406
ADR22155.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: phe:Phep_1912 helix-turn-helix domain protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator; PFAM: Helix-turn-helix.
   
 
 0.406
ADR22891.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: zpr:ZPR_2068 membrane protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
   
 
 0.406
ADR23470.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: hau:Haur_2753 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Transcriptional regulator, XRE family; PFAM: Helix-turn-helix.
   
 
 0.406
ADR23622.1
Helix-turn-helix domain protein; InterPro IPR001387: IPR010359; KEGG: dfe:Dfer_2636 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix; Domain of unknown function (DUF955).
   
 
 0.406
ADR23647.1
Helix-turn-helix domain protein; InterPro IPR001387; KEGG: fps:FP0735 putative DNA binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: Putative uncharacterized protein; PFAM: Helix-turn-helix.
   
 
 0.406
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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