STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21959.1KEGG: sli:Slin_1155 hypothetical protein; SPTR: Putative uncharacterized protein. (117 aa)    
Predicted Functional Partners:
ADR21958.1
Protein of unknown function DUF433; COGs: COG2442 conserved hypothetical protein; InterPro IPR007367; KEGG: rmr:Rmar_1887 protein of unknown function DUF433; PFAM: protein of unknown function DUF433; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF433).
 
   
 0.953
ADR22342.1
COGs: COG2405 nucleic acid-binding protein contains PIN domain; KEGG: cts:Ctha_1342 nucleic acid-binding protein contains PIN domain-like protein; SPTR: Putative uncharacterized protein; PFAM: Domain of unknown function (DUF3368).
  
     0.637
ADR21956.1
Protein of unknown function DUF2136; COGs: COG4680 conserved hypothetical protein; InterPro IPR018669; KEGG: gfo:GFO_0923 hypothetical protein; PFAM: Protein of unknown function DUF2136; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2136).
 
     0.556
ADR21957.1
Transcriptional regulator, XRE family; COGs: COG5499 transcription regulator containing HTH domain; InterPro IPR001387; KEGG: fps:FP1227 XRE family transcriptional regulator; SPTR: Helix-turn-helix motif.
 
     0.552
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.