STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21962.1Protein of unknown function DUF422; InterPro IPR007354; KEGG: afl:Aflv_2198 hypothetical protein; PFAM: protein of unknown function DUF422; SPTR: Membrane protein, putative; PFAM: Protein of unknown function (DUF422). (222 aa)    
Predicted Functional Partners:
ADR21961.1
COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR014105: IPR002937; KEGG: hau:Haur_0609 zeta-phytoene desaturase; PFAM: amine oxidase; SPTR: Gamma-carotene desaturase; TIGRFAM: phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase.
 
   
 0.952
ADR21581.1
Spheroidene monooxygenase; InterPro IPR001589; KEGG: jan:Jann_0144 spheroidene monooxygenase; SPTR: Spheroidene monooxygenase.
 
   
 0.775
ADR21461.1
COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060: IPR019845; KEGG: sli:Slin_5959 squalene/phytoene synthase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Phytoene synthetase; PFAM: Squalene/phytoene synthase.
 
   
 0.695
ADR21462.1
COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR002937: IPR014105; KEGG: sli:Slin_5960 phytoene desaturase; PFAM: amine oxidase; SPTR: Phytoene desaturase; TIGRFAM: phytoene desaturase; PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase.
 
   
 0.584
ADR21456.1
TonB-dependent receptor plug; InterPro IPR012910: IPR000531; KEGG: pdi:BDI_3481 putative TonB dependent outer membrane protein; PFAM: TonB-dependent receptor plug; TonB-dependent receptor; SPTR: TonB-dependent receptor plug; PFAM: TonB-dependent Receptor Plug Domain.
  
     0.528
ADR21464.1
Transcriptional regulator, MerR family; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: sli:Slin_5173 transcriptional regulator, MerR family; PFAM: regulatory protein MerR; SMART: regulatory protein MerR; SPTR: Transcriptional regulator, MerR family; PFAM: MerR family regulatory protein.
 
     0.492
ADR21824.1
KEGG: sli:Slin_1736 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.442
ADR21960.1
Histidine kinase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594: IPR005467; KEGG: bur:Bcep18194_C7668 GAF sensor hybrid histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; SPTR: GAF sensor hybrid histidine kinase; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
       0.434
ADR23692.1
Hypothetical protein; InterPro IPR018130; KEGG: cpi:Cpin_6196 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.404
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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