STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21973.1KEGG: srm:SRM_00019 hypothetical protein; SPTR: Lipoprotein, putative. (254 aa)    
Predicted Functional Partners:
ADR23568.1
Hypothetical protein; COGs: COG0348 Polyferredoxin; InterPro IPR017896: IPR017900; KEGG: zpr:ZPR_4197 iron-sulfur binding transmembrane protein; SPTR: 4Fe-4S binding domain protein.
  
     0.766
ADR23336.1
KEGG: gfo:GFO_3620 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.756
ADR23567.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase; COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027; KEGG: zpr:ZPR_4195 nitrite reductase (NAD(P)H) large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: NADH oxidase; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
  
     0.721
ADR22800.1
KEGG: zpr:ZPR_3092 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.701
ADR21485.1
KEGG: gfo:GFO_3614 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.681
ADR23334.1
COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: cat:CA2559_05405 putative glycosyltransferase; PFAM: glycosyl transferase family 2; SPTR: Dolichol phosphate mannosyltransferase or dolichol phosphate beta glucosyltrandferase; PFAM: Glycosyl transferase family 2.
  
     0.669
ADR23335.1
COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: sli:Slin_6620 glycosyl transferase family 2; PFAM: glycosyl transferase family 2; SPTR: Glycosyltransferase; PFAM: Glycosyl transferase family 2.
  
     0.612
ADR23133.1
Fatty acid hydroxylase; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: zpr:ZPR_1793 probable transmembrane protein; PFAM: fatty acid hydroxylase; SPTR: Probable transmembrane protein; PFAM: Fatty acid hydroxylase superfamily.
  
     0.582
ADR21972.1
ABC transporter related protein; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR017871: IPR003593: IPR003439: IPR013525; KEGG: pdi:BDI_1446 ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter related; ABC-2 type transporter; SMART: AAA ATPase; SPTR: ABC transporter ATP-binding protein, putative; PFAM: ABC transporter; Tellurite resistance protein TerB; ABC-2 type transporter.
       0.547
ADR23566.1
Protein of unknown function DUF547; InterPro IPR006869; KEGG: cat:CA2559_01395 hypothetical protein; PFAM: protein of unknown function DUF547; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function, DUF547.
  
     0.546
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.