STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21990.1KEGG: srm:SRM_01432 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF493). (88 aa)    
Predicted Functional Partners:
ADR21989.1
COGs: COG2154 Pterin-4a-carbinolamine dehydratase; InterPro IPR001533; KEGG: cpi:Cpin_1008 transcriptional coactivator/pterin dehydratase; PFAM: transcriptional coactivator/pterin dehydratase; SPTR: Pterin-4-alpha-carbinolamine dehydratase; PFAM: Pterin 4 alpha carbinolamine dehydratase.
       0.617
ADR21991.1
COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: dfe:Dfer_4724 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain.
  
    0.613
rsmI
Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.578
ADR21986.1
Inositol monophosphatase; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR020583: IPR020550: IPR000760; KEGG: phe:Phep_2935 inositol monophosphatase; PFAM: inositol monophosphatase; SPTR: Inositol monophosphatase; PFAM: Inositol monophosphatase family.
       0.568
ADR21985.1
KEGG: bth:BT_0407 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.558
ADR21987.1
KEGG: dfe:Dfer_4998 hypothetical protein; SPTR: Putative transmembrane protein.
       0.558
ADR21994.1
Hypothetical protein; InterPro IPR013026; KEGG: bvu:BVU_2563 hypothetical protein; SPTR: TPR domain protein.
 
     0.509
ADR20894.1
KEGG: gfo:GFO_1825 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.504
ADR20885.1
Outer membrane lipoprotein P61; InterPro IPR019734: IPR013026; KEGG: chu:CHU_2679 outer membrane lipoprotein P61; SPTR: Probable outer membrane lipoprotein P61.
  
 
   0.479
ADR21192.1
Lysine exporter protein (LYSE/YGGA); COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: zpr:ZPR_0018 LysE type amino acid translocator; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Translocator protein, LysE family; PFAM: LysE type translocator.
  
     0.473
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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