STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR21992.1COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550: IPR000644: IPR005170; KEGG: sli:Slin_1440 transporter-associated region; PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SPTR: Putative hemolysin; PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain. (424 aa)    
Predicted Functional Partners:
ADR21991.1
COGs: COG0760 Parvulin-like peptidyl-prolyl isomerase; InterPro IPR000297; KEGG: dfe:Dfer_4724 PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; PFAM: PPIC-type PPIASE domain.
       0.578
ADR21994.1
Hypothetical protein; InterPro IPR013026; KEGG: bvu:BVU_2563 hypothetical protein; SPTR: TPR domain protein.
 
     0.508
ADR21993.1
Protein of unknown function DUF1239; InterPro IPR010664; KEGG: chu:CHU_3270 hypothetical protein; PFAM: protein of unknown function DUF1239; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1239).
       0.503
ADR20620.1
MotA/TolQ/ExbB proton channel; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: zpr:ZPR_4545 ExbB-like MotA/TolQ/ExbB family biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: MotA/TolQ/ExbB proton channel family protein; PFAM: MotA/TolQ/ExbB proton channel family.
  
     0.466
ADR21990.1
KEGG: srm:SRM_01432 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF493).
       0.450
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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