STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22036.1COGs: COG0297 Glycogen synthase; InterPro IPR013534; KEGG: sli:Slin_4463 starch synthase; PFAM: Starch synthase catalytic domain-containing protein; SPTR: Glycogen synthase; PFAM: Starch synthase catalytic domain. (292 aa)    
Predicted Functional Partners:
ADR23381.1
Glycoside hydrolase family 13 domain protein; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589: IPR004193: IPR006047: IPR006048; KEGG: chu:CHU_1345 glycogen branching protein; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain; SPTR: Candidate glycogen branching enzyme, glycoside hydrolase family 13 protein; PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain.
 
 
 0.985
ADR23544.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0802 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: A-glycosyltransferase-related protein, glycosyltransferase family 4 protein; PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1.
     
 0.902
ADR23546.1
Glycogen(starch) synthase; InterPro IPR008631; KEGG: chu:CHU_1581 glycogen synthase, glycosyltransferase family 3 protein; PFAM: glycogen synthase; PRIAM: Glycogen(starch) synthase; SPTR: Candidate glycogen synthase, Glycosyltransferase Family 3 protein; PFAM: Glycogen synthase.
     
 0.902
glmS
Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
     
 0.810
ADR22037.1
KEGG: fjo:Fjoh_1685 hypothetical protein; SPTR: Putative uncharacterized protein.
  
    0.801
ADR20734.1
Alpha amylase catalytic region; COGs: COG0296 1 4-alpha-glucan branching enzyme; InterPro IPR006589: IPR004193: IPR006047; KEGG: sli:Slin_0361 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain; SPTR: Alpha-amylase; PFAM: Alpha amylase, catalytic domain; Belongs to the glycosyl hydrolase 13 family.
 
  
 0.763
ADR20477.1
Alpha amylase catalytic region; InterPro IPR006046: IPR006047: IPR015237: IPR006589; KEGG: fjo:Fjoh_1948 cytoplasmic alpha-amylase; PFAM: alpha amylase catalytic region; Domain of unknown function DUF1939; SMART: alpha amylase catalytic sub domain; SPTR: Candidate alpha amylase; Glycoside hydrolase family 13; PFAM: Alpha amylase, catalytic domain; Domain of unknown function (DUF1939); Belongs to the glycosyl hydrolase 13 family.
 
  
 0.743
ADR20150.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006047: IPR006589; KEGG: hor:Hore_22530 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: Oligo-1,6-glucosidase; PFAM: Alpha amylase, catalytic domain.
  
 0.698
ADR21963.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR000601: IPR006589: IPR006047; KEGG: chl:Chy400_0553 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; PKD domain containing protein; SMART: alpha amylase catalytic sub domain; PKD domain containing protein; SPTR: Alpha amylase catalytic region; PFAM: Alpha amylase, catalytic domain; PKD domain.
  
 0.642
ADR20727.1
Alpha amylase catalytic region; COGs: COG0366 Glycosidase; InterPro IPR006589: IPR006047: IPR006046; KEGG: sli:Slin_0347 alpha amylase catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; SPTR: AmyM; PFAM: Alpha amylase, catalytic domain.
  
 0.636
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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