STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22041.1KEGG: fjo:Fjoh_3090 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated. (68 aa)    
Predicted Functional Partners:
ADR22040.1
Cation efflux protein; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: zpr:ZPR_4062 integral membrane protein; PFAM: cation efflux protein; SPTR: Integral membrane protein; PFAM: Cation efflux family.
  
 
 0.800
ADR20966.1
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate.
  
    0.565
ADR22042.1
InterPro IPR006121; KEGG: zpr:ZPR_3369 protein containing heavy-metal-associated domain; SPTR: Protein containing heavy-metal-associated domain; PFAM: Heavy-metal-associated domain.
     
 0.498
ADR22043.1
Heavy metal translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR018303: IPR017969: IPR000150: IPR006403: IPR 006416: IPR001757: IPR006121: IPR008250: IPR005834: IPR001756; KEGG: zpr:ZPR_3370 putative copper transport-related membrane protein; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Putative copper transport-related membrane protein; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD sup [...]
  
 
 0.487
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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