STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22046.1KEGG: gfo:GFO_2947 hypothetical protein; SPTR: Lipoprotein, putative; PFAM: Protein of unknown function (DUF2911). (316 aa)    
Predicted Functional Partners:
ADR20217.1
LmbE family protein; InterPro IPR003737; KEGG: zpr:ZPR_2320 secreted protein; PFAM: LmbE family protein; SPTR: GlcNAc-PI de-N-acetylase family; PFAM: GlcNAc-PI de-N-acetylase.
 
     0.709
ADR20152.1
SSS sodium solute transporter superfamily; COGs: COG0591 Na+/proline symporter; InterPro IPR001734: IPR019900; KEGG: gfo:GFO_1817 Na+/solute symporter; PFAM: Na+/solute symporter; SPTR: Na+/solute symporter; TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.694
ADR22047.1
COGs: COG1830 DhnA-type fructose-1 6-bisphosphate aldolase; InterPro IPR002915; KEGG: zpr:ZPR_3401 fructose-bisphosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; SPTR: Fructose-bisphosphate aldolase; PFAM: DeoC/LacD family aldolase.
       0.686
ADR22048.1
Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR001958; KEGG: zpr:ZPR_3415 multidrug-efflux transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Multidrug-efflux transporter; PFAM: Major Facilitator Superfamily.
       0.623
ADR22049.1
Copper-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR018303: IPR006403: IPR006416: IPR001757: IPR 008250: IPR005834: IPR000695; KEGG: zpr:ZPR_3414 copper-transporting ATPase, P-type (CopB); PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Copper-transporting ATPase, P-type (CopB); TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or [...]
       0.623
ADR22050.1
Protein of unknown function DUF344; COGs: COG2326 conserved hypothetical protein; InterPro IPR016898: IPR005660; KEGG: cpi:Cpin_0387 protein of unknown function DUF344; PFAM: protein of unknown function DUF344; SPTR: Putative uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family.
       0.611
ADR22051.1
KEGG: zpr:ZPR_3413 phosphoribosylpyrophosphate synthetase; SPTR: Phosphoribosylpyrophosphate synthetase; manually curated.
       0.611
ADR22052.1
Amino acid/polyamine/organocation transporter, APC superfamily; COGs: COG0531 Amino acid transporter; InterPro IPR002293: IPR004841; KEGG: rbi:RB2501_04725 amino acid transporter; PFAM: amino acid permease-associated region; SPTR: Amino acid permease-associated region protein; PFAM: Amino acid permease; TC 2.A.3.
       0.611
bshC
Protein of unknown function UCP012535; COGs: COG4365 conserved hypothetical protein; InterPro IPR011199; KEGG: sli:Slin_5360 protein of unknown function UCP012535; PFAM: protein of unknown function UCP012535; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2317); Belongs to the BshC family.
  
     0.582
ADR23285.1
COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: chu:CHU_0012 A-glycosyltransferase; PFAM: glycosyl transferase group 1; SPTR: Glycosyl transferase, group 1 family protein; PFAM: Glycosyl transferases group 1.
  
    0.577
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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