STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22057.1ATP-cone domain protein; InterPro IPR005144: IPR007560; KEGG: zpr:ZPR_3407 putative nuclease; PFAM: ATP-cone domain protein; restriction endonuclease; SPTR: Putative uncharacterized protein; PFAM: ATP cone domain; Restriction endonuclease. (282 aa)    
Predicted Functional Partners:
ADR22056.1
RNA-metabolising metallo-beta-lactamase; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR011108; KEGG: zpr:ZPR_3409 metallo-beta-lactamase superfamily protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Metallo-beta-lactamase superfamily protein; PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain.
 
     0.850
ADR22054.1
Ribose-phosphate pyrophosphokinase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR005946: IPR000836; KEGG: zpr:ZPR_3411 phosphoribosyl transferase; PFAM: phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Putative uncharacterized protein; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase.
 
   
 0.828
ADR22055.1
COGs: COG0213 Thymidine phosphorylase; InterProIPR017872: IPR016160: IPR013466: IPR000053: IPR 017459: IPR013102; KEGG: rbi:RB2501_04835 thymidine phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like; PRIAM: Thymidine phosphorylase; SPTR: Putative thymidine phosphorylase; TIGRFAM: thymidine phosphorylase; PFAM: Pyrimidine nucleoside phosphorylase C-terminal domain; Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: putative thymidine phosphorylase.
       0.786
ADR22053.1
KEGG: zpr:ZPR_3412 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.780
ADR22051.1
KEGG: zpr:ZPR_3413 phosphoribosylpyrophosphate synthetase; SPTR: Phosphoribosylpyrophosphate synthetase; manually curated.
 
   
 0.752
ADR22048.1
Major facilitator superfamily MFS_1; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701: IPR001958; KEGG: zpr:ZPR_3415 multidrug-efflux transporter; PFAM: major facilitator superfamily MFS_1; SPTR: Multidrug-efflux transporter; PFAM: Major Facilitator Superfamily.
 
     0.735
ADR22050.1
Protein of unknown function DUF344; COGs: COG2326 conserved hypothetical protein; InterPro IPR016898: IPR005660; KEGG: cpi:Cpin_0387 protein of unknown function DUF344; PFAM: protein of unknown function DUF344; SPTR: Putative uncharacterized protein; PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family.
       0.701
ADR22052.1
Amino acid/polyamine/organocation transporter, APC superfamily; COGs: COG0531 Amino acid transporter; InterPro IPR002293: IPR004841; KEGG: rbi:RB2501_04725 amino acid transporter; PFAM: amino acid permease-associated region; SPTR: Amino acid permease-associated region protein; PFAM: Amino acid permease; TC 2.A.3.
       0.701
ADR22049.1
Copper-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR018303: IPR006403: IPR006416: IPR001757: IPR 008250: IPR005834: IPR000695; KEGG: zpr:ZPR_3414 copper-transporting ATPase, P-type (CopB); PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; SPTR: Copper-transporting ATPase, P-type (CopB); TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or [...]
       0.686
ADR22047.1
COGs: COG1830 DhnA-type fructose-1 6-bisphosphate aldolase; InterPro IPR002915; KEGG: zpr:ZPR_3401 fructose-bisphosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; SPTR: Fructose-bisphosphate aldolase; PFAM: DeoC/LacD family aldolase.
       0.641
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.