STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22074.1Transcriptional regulator, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060: IPR000005: IPR006121; KEGG: cat:CA2559_00255 putative regulatory protein; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; SPTR: Putative regulatory protein; PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family. (287 aa)    
Predicted Functional Partners:
ADR22073.1
KEGG: zpr:ZPR_4243 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.491
ADR22071.1
YHS domain-containing protein; InterPro IPR007029; KEGG: tau:Tola_1985 heavy metal translocating P-type ATPase; PFAM: YHS domain-containing protein; SPTR: Heavy metal translocating P-type ATPase; PFAM: YHS domain.
  
    0.474
ADR22072.1
Protein of unknown function DUF302; COGs: COG3439 conserved hypothetical protein; InterPro IPR016796: IPR005180; KEGG: gfo:GFO_1289 hypothetical protein; PFAM: protein of unknown function DUF302; SPTR: Protein containing DUF302; PFAM: Domain of unknown function DUF302.
       0.470
ADR22075.1
Hypothetical protein; KEGG: ngr:NAEGRDRAFT_59829 cation efflux protein; SPTR: Cation efflux protein.
       0.429
ADR22070.1
InterPro IPR018649; KEGG: zpr:ZPR_3394 predicted membrane protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2078).
 
     0.424
ADR22042.1
InterPro IPR006121; KEGG: zpr:ZPR_3369 protein containing heavy-metal-associated domain; SPTR: Protein containing heavy-metal-associated domain; PFAM: Heavy-metal-associated domain.
 
     0.420
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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