STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22080.1COGs: COG2132 Putative multicopper oxidase; InterProIPR002355: IPR006311: IPR011707: IPR011706: IPR 017909; KEGG: gfo:GFO_1338 CotA-like multicopper oxidase; PFAM: multicopper oxidase type 3; multicopper oxidase type 2; SPTR: CotA-like multicopper oxidase; PFAM: Multicopper oxidase; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence. (564 aa)    
Predicted Functional Partners:
ADR22078.1
KEGG: cel:T28F3.5 hypothetical protein; SPTR: Protein T28F3.5a, partially confirmed by transcript evidence.
       0.773
ADR22079.1
Hypothetical protein; InterPro IPR000589; KEGG: rbi:RB2501_04685 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR22081.1
Amino acid/polyamine/organocation transporter, APC superfamily; COGs: COG0531 Amino acid transporter; InterPro IPR002293: IPR004841; KEGG: rbi:RB2501_04725 amino acid transporter; PFAM: amino acid permease-associated region; SPTR: Amino acid permease-associated region protein; PFAM: Amino acid permease; TC 2.A.3.
     
 0.504
ADR22082.1
InterPro IPR018649; KEGG: hma:pNG6050 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: Putative uncharacterized protein; PFAM: Predicted membrane protein (DUF2078).
       0.493
tatC
Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
    
 
 0.442
ADR22083.1
Rhodanese domain protein; InterPro IPR001763; KEGG: tbd:Tbd_1650 rhodanese-like protein; SMART: Rhodanese domain protein; SPTR: Rhodanese-like protein; PFAM: Rhodanese-like domain.
 
     0.406
ADR23661.1
Cytochrome oxidase assembly; COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; InterPro IPR003780; KEGG: phe:Phep_0296 cytochrome oxidase assembly; PFAM: cytochrome oxidase assembly; SPTR: Cytochrome oxidase assembly protein; PFAM: Cytochrome oxidase assembly protein.
  
   
 0.402
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.