STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22113.1KEGG: bfr:BF0046 hypothetical protein; SPTR: Putative uncharacterized protein. (385 aa)    
Predicted Functional Partners:
ADR22112.1
KEGG: gfo:GFO_0295 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.773
ADR20960.1
COGs: COG1858 Cytochrome c peroxidase; InterPro IPR009056: IPR004852; KEGG: dfe:Dfer_5340 cytochrome-c peroxidase; PFAM: Di-haem cytochrome c peroxidase; PRIAM: Cytochrome-c peroxidase; SPTR: Methylamine utilization protein MauG; manually curated; PFAM: Di-haem cytochrome c peroxidase.
  
 
 0.689
ADR22114.1
Hypothetical protein.
       0.586
ADR22722.1
COGs: COG3256 Nitric oxide reductase large subunit; InterPro IPR000883; KEGG: lbf:LBF_2854 nitric oxide reductase large subunit; PFAM: cytochrome c oxidase subunit I; PRIAM: Nitric-oxide reductase; SPTR: Nitric-oxide reductase subunit B; PFAM: Cytochrome C and Quinol oxidase polypeptide I; Belongs to the heme-copper respiratory oxidase family.
  
 
 0.554
ADR20696.1
Azurin; COGs: COG3241 Azurin; InterPro IPR000923: IPR014068; KEGG: dfe:Dfer_2909 azurin; PFAM: blue (type 1) copper domain protein; SPTR: Azurin; TIGRFAM: azurin; PFAM: Copper binding proteins, plastocyanin/azurin family; TIGRFAM: azurin.
    
 
 0.544
ADR22702.1
COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR009056: IPR003468: IPR003088; KEGG: gfo:GFO_1397 cbb3-type cytochrome c oxidase subunit II; PFAM: cytochrome C oxidase mono-heme subunit/FixO; cytochrome c class I; SPTR: Cbb3-type cytochrome c oxidase subunit II; PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II.
  
 
 0.409
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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