STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22117.1COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; KEGG: gfo:GFO_0238 1-aminocyclopropane-1-carboxylate deaminase; SPTR: Putative D-cysteine desulfhydrase DcyD. (299 aa)    
Predicted Functional Partners:
ADR21282.1
Transketolase central region; COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR001017: IPR005475: IPR005476; KEGG: cpi:Cpin_1538 transketolase central region; PFAM: Transketolase central region; dehydrogenase E1 component; Transketolase domain-containing protein; SPTR: Transketolase central region; PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain.
     
  0.800
ADR22793.1
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR001017: IPR005475: IPR005476; KEGG: chu:CHU_3183 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion; PFAM: dehydrogenase E1 component; Transketolase central region; Transketolase domain-containing protein; PRIAM: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring); SPTR: 2-oxoisovalerate dehydrogenase beta subunit; PFAM: Dehydrogenase E1 component; Tr [...]
     
  0.800
ADR22116.1
KEGG: cpi:Cpin_0142 hypothetical protein; SPTR: Lipoprotein, putative.
       0.554
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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