STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22142.1Hypothetical protein; KEGG: tca:661133 similar to Metabotropic glutamate receptor precursor; SPTR: Putative uncharacterized protein. (267 aa)    
Predicted Functional Partners:
ADR22141.1
Peptidase S41; COGs: COG0793 Periplasmic protease; InterPro IPR005151: IPR019825; KEGG: pdi:BDI_3195 hypothetical protein; PFAM: peptidase S41; SMART: peptidase S41; SPTR: Putative uncharacterized protein; PFAM: Peptidase family S41.
       0.786
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.773
ADR22144.1
Kef-type potassium/proton antiporter, CPA2 family; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR003148: IPR006037: IPR006153; KEGG: gfo:GFO_1965 KefB-and KefC-like glutathione-regulated potassium-efflux system protein; PFAM: sodium/hydrogen exchanger; TrkA-N domain protein; TrkA-C domain protein; SPTR: KefB-and KefC-like glutathione-regulated potassium-efflux system protein; PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TrkA-C domain; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; TC 2.A.37.1.
       0.642
ADR22145.1
TonB-dependent receptor; InterPro IPR012910: IPR000531; KEGG: dfe:Dfer_5310 hypothetical protein; PFAM: TonB-dependent receptor; TonB-dependent receptor plug; SPTR: TonB-dependent receptor plug domain protein.
       0.404
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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