STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADR22178.1KEGG: chu:CHU_1023 hypothetical protein; SPTR: Putative uncharacterized protein. (486 aa)    
Predicted Functional Partners:
ADR22177.1
WD40 repeat, subgroup; COGs: COG2319 FOG: WD40 repeat; InterProIPR019782: IPR017986: IPR019781: IPR001680: IPR 019775; KEGG: chu:CHU_1024 hypothetical protein; PFAM: WD40 repeat, subgroup; SPTR: Peptidase C14, caspase catalytic subunit p20, putative; PFAM: WD domain, G-beta repeat.
       0.801
ADR22179.1
Cyclic nucleotide-binding protein; COGs: COG3202 ATP/ADP translocase; InterPro IPR000595; KEGG: chu:CHU_1022 hypothetical protein; PFAM: cyclic nucleotide-binding; SPTR: Cyclic nucleotide-binding domain protein.
       0.785
ADR22176.1
KEGG: chu:CHU_1025 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.781
ADR22175.1
KEGG: dtu:Dtur_1286 lipoprotein, putative; SPTR: PKD.
       0.773
ADR22174.1
Fibronectin type III domain protein; InterPro IPR003961: IPR008162; KEGG: sdn:Sden_3728 cadherin; PFAM: Fibronectin type III domain protein; SPTR: Cadherin.
       0.709
ADR22180.1
KEGG: tpt:Tpet_0897 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.420
ADR22181.1
COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: pdi:BDI_2285 putative beta-lactamase; PFAM: beta-lactamase; SPTR: Putative beta-lactamase; PFAM: Beta-lactamase.
       0.420
Your Current Organism:
Marivirga tractuosa
NCBI taxonomy Id: 643867
Other names: Flexibacter tractuosus DSM 4126, Flexibacter tractuosus IFO 15989, M. tractuosa DSM 4126, Marivirga tractuosa DSM 4126, Marivirga tractuosa IFO 15989, Marivirga tractuosa str. DSM 4126, Marivirga tractuosa strain DSM 4126
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